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kapa stranded rna seq library prep kit  (Roche)
99
Roche kapa stranded rna seq library prep kit
Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
Kapa Stranded Rna Seq Library Prep Kit, supplied by Roche, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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smart seq v4 ultra low input rna kit  (TaKaRa)
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TaKaRa smart seq v4 ultra low input rna kit
Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
Smart Seq V4 Ultra Low Input Rna Kit, supplied by TaKaRa, used in various techniques. Bioz Stars score: 98/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ion total rna seq kit v2  (Thermo Fisher)
86
Thermo Fisher ion total rna seq kit v2
Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
Ion Total Rna Seq Kit V2, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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ion total rna seq kit v2 - by Bioz Stars, 2026-05
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mcfdna seq  (Karius Inc)
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Karius Inc mcfdna seq
Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
Mcfdna Seq, supplied by Karius Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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nextflex rapid dna seq kit  (Bioo Scientific)
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Bioo Scientific nextflex rapid dna seq kit
Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
Nextflex Rapid Dna Seq Kit, supplied by Bioo Scientific, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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rna seq  (Azenta)
86
Azenta rna seq
Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA <t>sequences.</t> <t>RNA-seq</t> was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.
Rna Seq, supplied by Azenta, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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rna seq service  (Azenta)
86
Azenta rna seq service
Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
Rna Seq Service, supplied by Azenta, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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rna seq raw data  (Biotechnology Information)
86
Biotechnology Information rna seq raw data
Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
Rna Seq Raw Data, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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nebnext ultra ii directional rna seq kit  (New England Biolabs)
99
New England Biolabs nebnext ultra ii directional rna seq kit
Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® <t>using</t> <t>RNA-seq</t> service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.
Nebnext Ultra Ii Directional Rna Seq Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA sequences. RNA-seq was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.

Journal: Bioactive Materials

Article Title: Small extracellular vesicle-integrated by herbal hydrogels for spatiotemporal immunomodulation and neurovascular repair following traumatic brain injury

doi: 10.1016/j.bioactmat.2026.02.056

Figure Lengend Snippet: Mechanism-specific prediction of TBI treatment by EG-gel. (A) Principal component analysis (PCA) of Sham, TBI, and EG-gel groups in transcriptomic space. (B) Volcano plots of differentially expressed genes for Sham vs TBI and TBI vs EG-gel comparisons. Red and blue points indicate significantly up and downregulated genes. (C) Venn diagrams of mRNA expression among the three groups. (D) Heat map of differentially expressed genes among the three groups. (E) KEGG pathway analysis for differentially expressed genes. (F) The top 20 of KEGG terms enrichment of RNA sequences. (G) Bar chart of the top 20 enriched GO terms of RNA sequences. RNA-seq was performed on peri-injury cortical tissue (n = 6 per group), differential expression was called using fold change ≥1.5, p-value <0.05, q-value <0.05, and group mean FPKM ≥0.5.

Article Snippet: For library construction, 1–2 μg of total RNA per sample was used. mRNA was enriched using oligo (dT) selection, and libraries were prepared using the KAPA Stranded RNA-Seq Library Prep Kit (Roche).

Techniques: Expressing, RNA Sequencing, Quantitative Proteomics

Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® using RNA-seq service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.

Journal: Metabolic Engineering Communications

Article Title: Elucidating biodegradation of dimethyl terephthalate by two Rhodococcus strains for its valorization applications

doi: 10.1016/j.mec.2026.e00271

Figure Lengend Snippet: Transcriptomic analyses of PD630 and RPET. a) Results of PD630; b) Results of RPET. The volcano plots illustrate differential gene expression in response to DMT, determined by transcriptomic analysis. Red and blue dots represent genes with statistically significant up- and down-regulation, respectively (|log 2 (fold change)| > 1 and adjusted p -value <0.05); black dots indicate genes with statistically insignificant changes. The horizontal dashed line represents adjusted p -value = 0.05. Transcriptomic data were generated by Genewiz® using RNA-seq service. The control groups were cultured in minimal media with glucose as the sole carbon source, while the experimental groups were cultured in minimal media with glucose and DMT (see Materials and Methods for details). Data analysis was conducted in R software using DESeq2 and clusterProfiler.

Article Snippet: Transcriptomic data were generated by Genewiz® using RNA-seq service.

Techniques: Gene Expression, Generated, RNA Sequencing, Control, Cell Culture, Software